BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029A11SP1|AL429008
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1229 1724 0.0
>3x_Contig1229
Length = 4630
Score = 1724 bits (867), Expect = 0.0
Identities = 881/887 (99%), Gaps = 1/887 (0%)
Strand = Plus / Plus
Query: 1 tagtcaccctgcaatgtcgcacagtacctgcagtactaagctcgtttctctaccacaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tagtcaccctgcaatgtcgcacagtacctgcagtactaagctcgtttctctaccacaatt 414
Query: 61 tccttagcttcttttttttggattttttcagtttaaactgccctgggaaagatgctggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tccttagcttcttttttttggattttttcagtttaaactgccctgggaaagatgctggaa 474
Query: 121 atcaatttgcgatatataaaatagataaaatacatctatatatatatatatatagkakgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 475 atcaatttgcgatatataaaatagataaaatacatctatatatatatatatatagtatgc 534
Query: 181 atcatattatgtattcaagtacatttattgaaactaggcctgttctcgtagaaatcagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atcatattatgtattcaagtacatttattgaaactaggcctgttctcgtagaaatcagct 594
Query: 241 tcaaattatttcgttcgagtggactgaaaggttgaacgcaccctggttattagttgtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tcaaattatttcgttcgagtggactgaaaggttgaacgcaccctggttattagttgtttc 654
Query: 301 tcattaattaatcttcttttttttaagtgtgtgagtgtggaaaagtggtcatactaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcattaattaatcttcttttttttaagtgtgtgagtgtggaaaagtggtcatactaaaat 714
Query: 361 cgtctttcggttatkaactcacactttagtcgcatgttccttcagatacacgacaaatag 420
|||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 715 cgtctttcggttattaattcaca-tttagtcgcatgttccttcagatacacgacaaatag 773
Query: 421 gagaataaaccgttttcaagttcagaagaaatcaaatatcatcagtcaacacattaacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gagaataaaccgttttcaagttcagaagaaatcaaatatcatcagtcaacacattaacta 833
Query: 481 tgccatctttgttaggtttgtctttccataggaagaagactcattcttcgtcacagttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 tgccatctttgttaggtttgtctttccataggaagaagactcattcttcgtcacagttga 893
Query: 541 gtttggcatccggagcgactgcggagaagagcgaggacacggacgttcgtctccttcttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gtttggcatccggagcgactgcggagaagagcgaggacacggacgttcgtctccttcttc 953
Query: 601 cggatcaccaaatagtcatcatcacaacaataatagcaataatagtagcaataaaccaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 cggatcaccaaatagtcatcatcacaacaataatagcaataatagtagcaataaaccaca 1013
Query: 661 tcatactgagtcatttacgcattcggtggcagcttttctggaaccgggtcataatttcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 tcatactgagtcatttacgcattcggtggcagcttttctggaaccgggtcataatttcac 1073
Query: 721 tccttcttccggtcatagcgatcgtcgtggtacaacggtaacagcagtgaccgctgctgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 tccttcttccggtcatagcgatcgtcgtggtacaacggtaacagcagtgaccgctgctgg 1133
Query: 781 tcccgtacaatctgtttccgccagcacgcagcagcttctgcatgataacggtagcagtha 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1134 tcccgtacaatctgtttccgccagcacgcagcagcttctgcatgataacggtagcagtaa 1193
Query: 841 caaccacagtcataatgccaacgggtcatgtgcgaatccgcatcaac 887
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 caaccacagtcataatgccaacgggtcatgtgcgaatccgcatcaac 1240
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,805
Number of Sequences: 1807
Number of extensions: 11805
Number of successful extensions: 1608
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)